Program Official

Principal Investigator

Fabien
Maldonado
Awardee Organization

Vanderbilt University Medical Center
United States

Fiscal Year
2024
Activity Code
R01
Early Stage Investigator Grants (ESI)
Not Applicable
Project End Date

Novel Integrative Approach for the Early Detection of Lung Cancer using Repeated Measures

This application is being submitted in response to the Notice of Special Interest (NOSI) identified as “NOT-CA24-058.” Lung cancer remains the leading cause of cancer-related deaths worldwide, with early detection being critical for improving prognosis. The National Lung Screening Trial (NLST) provides a comprehensive dataset of longitudinal low-dose CT scans, offering a unique opportunity to study the natural history of lung nodules. This project aims to improve early diagnosis of lung cancer by characterizing the differential trajectory of benign and malignant nodules on serial CTs, identifying and longitudinally tracking all nodules across NLST participants. By modeling the natural course of nodules on serial imaging studies within the NLST, we will expedite the identification of patients who develop cancer and those who do not, and better understand the natural history of individual nodules and nodule loadings within each patient. The parent project, a prospective observational trial, has successfully recruited a diverse cohort of participants and advanced AI-based algorithms for nodule assessment and cancer risk stratification, integrating longitudinal multimodal data. Since our initial proposal in 2019, substantial technological innovations in AI and CT harmonization have emerged, enhancing our potential to accurately characterize lung nodules. Specifically, our team has developed innovative AI-based kernel harmonization techniques and body composition analysis, significantly improving nodule assessment accuracy. These advancements have positioned us well to explore new avenues in lung cancer detection and risk assessment, justifying the need for supplemental funding to integrate these emerging technologies and expand our research scope. The proposed supplemental project introduces innovative approaches to lung cancer detection by longitudinally tracking all nodules across multiple CT scans, providing a dynamic view of nodule behavior. By employing kernel harmonization techniques, we will ensure consistent and reliable biomarker measurements across different machines, acquisition protocols, and reconstructions, enhancing the robustness of our models. Additionally, incorporating radiologic features beyond the spatial boundaries of the nodules, such as tumor-free surrounding lung parenchyma and patient-specific characteristics like body habitus, will offer a personalized understanding of nodule dynamics and lung cancer risk, improving precision in risk stratification and aiding early detection efforts. The overall impact of the project is to improve the early detection and risk stratification of lung cancer by leveraging the comprehensive NLST dataset. By characterizing the natural history of lung nodules and understanding the influence of patient characteristics, the developed models and biomarkers will provide valuable tools for radiologists and clinicians, enhancing precision cancer screening and ultimately reducing lung cancer mortality. The improved understanding of the natural history of lung nodules will ideally position the next stage of efforts for AI validation in randomized control trials, both by our team and others.

Publications

  • Krishnan AR, Xu K, Li T, Gao C, Remedios LW, Kanakaraj P, Lee HH, Bao S, Sandler KL, Maldonado F, Išgum I, Landman BA. Inter-vendor harmonization of CT reconstruction kernels using unpaired image translation. Proceedings of SPIE--the International Society for Optical Engineering. 2024 Feb;12926. Epub 2024 Apr 2. PMID: 39268356
  • Li TZ, Xu K, Chada NC, Chen H, Knight M, Antic S, Sandler KL, Maldonado F, Landman BA, Lasko TA. Curating retrospective multimodal and longitudinal data for community cohorts at risk for lung cancer. Cancer biomarkers : section A of Disease markers. 2024 Mar 7. Epub 2024 Mar 7. PMID: 38517780
  • Heideman BE, Kammer MN, Paez R, Swanson T, Godfrey CM, Low SW, Xiao D, Li TZ, Richardson JR, Knight MA, Shojaee S, Deppen SA, Lentz RJ, Grogan EL, Maldonado F. The Lung Cancer Prediction Model "Stress Test": Assessment of Models' Performance in a High-Risk Prospective Pulmonary Nodule Cohort. CHEST pulmonary. 2024 Mar;2. (1). Epub 2023 Dec 26. PMID: 38737731
  • Kammer MN, Rowe DJ, Deppen SA, Grogan EL, Kaizer AM, Barón AE, Maldonado F. The Intervention Probability Curve: Modeling the Practical Application of Threshold-Guided Decision-Making, Evaluated in Lung, Prostate, and Ovarian Cancers. Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. 2022 Sep 2;31(9):1752-1759. PMID: 35732292
  • Xu K, Khan MS, Li TZ, Gao R, Terry JG, Huo Y, Lasko TA, Carr JJ, Maldonado F, Landman BA, Sandler KL. AI Body Composition in Lung Cancer Screening: Added Value Beyond Lung Cancer Detection. Radiology. 2023 Jul;308(1):e222937. PMID: 37489991
  • Li TZ, Xu K, Gao R, Tang Y, Lasko TA, Maldonado F, Sandler KL, Landman BA. Time-distance vision transformers in lung cancer diagnosis from longitudinal computed tomography. Proceedings of SPIE--the International Society for Optical Engineering. 2023 Feb;12464. Epub 2023 Apr 3. PMID: 37465096
  • Xu K, Khan MS, Li T, Gao R, Antic SL, Huo Y, Sandler KL, Maldonado F, Landman BA. Stratification of Lung Cancer Risk with Thoracic Imaging Phenotypes. Proceedings of SPIE--the International Society for Optical Engineering. 2023 Feb;12464. Epub 2023 Apr 11. PMID: 37465098
  • Gao R, Li T, Tang Y, Xu K, Khan M, Kammer M, Antic SL, Deppen S, Huo Y, Lasko TA, Sandler KL, Maldonado F, Landman BA. Reducing uncertainty in cancer risk estimation for patients with indeterminate pulmonary nodules using an integrated deep learning model. Computers in biology and medicine. 2022 Nov;150:106113. Epub 2022 Sep 29. PMID: 36198225
  • Gao R, Tang Y, Xu K, Kammer MN, Antic SL, Deppen S, Sandler KL, Massion PP, Huo Y, Landman BA. Deep Multi-path Network Integrating Incomplete Biomarker and Chest CT Data for Evaluating Lung Cancer Risk. Proceedings of SPIE--the International Society for Optical Engineering. 2021 Feb;11596. Epub 2021 Feb 15. PMID: 34650321
  • Godfrey CM, Shipe ME, Welty VF, Maiga AW, Aldrich MC, Montgomery C, Crockett J, Vaszar LT, Regis S, Isbell JM, Rickman OB, Pinkerman R, Lambright ES, Nesbitt JC, Maldonado F, Blume JD, Deppen SA, Grogan EL. The Thoracic Research Evaluation and Treatment 2.0 Model: A Lung Cancer Prediction Model for Indeterminate Nodules Referred for Specialist Evaluation. Chest. 2023 Nov;164(5):1305-1314. Epub 2023 Jun 17. PMID: 37421973
  • Prosper AE, Kammer MN, Maldonado F, Aberle DR, Hsu W. Expanding Role of Advanced Image Analysis in CT-detected Indeterminate Pulmonary Nodules and Early Lung Cancer Characterization. Radiology. 2023 Oct;309(1):e222904. PMID: 37815447
  • Krishnan AR, Xu K, Li TZ, Remedios LW, Sandler KL, Maldonado F, Landman BA. Lung CT harmonization of paired reconstruction kernel images using generative adversarial networks. Medical physics. 2024 Aug;51(8):5510-5523. Epub 2024 Mar 26. PMID: 38530135
  • Xu K, Gao R, Tang Y, Deppen SA, Sandler KL, Kammer MN, Antic SL, Maldonado F, Huo Y, Khan MS, Landman BA. Extending the value of routine lung screening CT with quantitative body composition assessment. Proceedings of SPIE--the International Society for Optical Engineering. 2022 Feb-Mar;12032. Epub 2022 Apr 4. PMID: 36303578
  • Dong C, Li TZ, Xu K, Wang Z, Maldonado F, Sandler K, Landman BA, Huo Y. Characterizing browser-based medical imaging AI with serverless edge computing: towards addressing clinical data security constraints. Proceedings of SPIE--the International Society for Optical Engineering. 2023 Feb;12469. Epub 2023 Apr 10. PMID: 37063644
  • Li TZ, Hin Lee H, Xu K, Gao R, Dawant BM, Maldonado F, Sandler KL, Landman BA. Quantifying emphysema in lung screening computed tomography with robust automated lobe segmentation. Journal of medical imaging (Bellingham, Wash.). 2023 Jul;10(4):044002. Epub 2023 Jul 18. PMID: 37469854
  • Li TZ, Still JM, Xu K, Lee HH, Cai LY, Krishnan AR, Gao R, Khan MS, Antic S, Kammer M, Sandler KL, Maldonado F, Landman BA, Lasko TA. Longitudinal Multimodal Transformer Integrating Imaging and Latent Clinical Signatures From Routine EHRs for Pulmonary Nodule Classification. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 2023 Oct;14221:649-659. Epub 2023 Oct 1. PMID: 38779102
  • Paez R, Kammer MN, Balar A, Lakhani DA, Knight M, Rowe D, Xiao D, Heideman BE, Antic SL, Chen H, Chen SC, Peikert T, Sandler KL, Landman BA, Deppen SA, Grogan EL, Maldonado F. Longitudinal lung cancer prediction convolutional neural network model improves the classification of indeterminate pulmonary nodules. Scientific reports. 2023 Apr 15;13(1):6157. PMID: 37061539
  • Kammer MN, Heideman BE, Maldonado F. Should We Start With Navigation or Endobronchial Ultrasound Bronchoscopy?: Insights From Monte Carlo Simulations. Chest. 2022 Jul;162(1):265-268. Epub 2022 Mar 3. PMID: 35248550
  • Lasko TA, Strobl EV, Stead WW. Why do probabilistic clinical models fail to transport between sites. NPJ digital medicine. 2024 Mar 1;7(1):53. PMID: 38429353
  • Paez R, Kammer MN, Tanner NT, Shojaee S, Heideman BE, Peikert T, Balbach ML, Iams WT, Ning B, Lenburg ME, Mallow C, Yarmus L, Fong KM, Deppen S, Grogan EL, Maldonado F. Update on Biomarkers for the Stratification of Indeterminate Pulmonary Nodules. Chest. 2023 Oct;164(4):1028-1041. Epub 2023 May 25. PMID: 37244587
  • Xu K, Li TZ, Terry JG, Krishnan AR, Deppen SA, Huo Y, Maldonado F, Carr JJ, Landman BA, Sandler KL. Age-related Muscle Fat Infiltration in Lung Screening Participants: Impact of Smoking Cessation. medRxiv : the preprint server for health sciences. 2023 Dec 5. PMID: 38106099
  • Xu K, Li T, Khan MS, Gao R, Antic SL, Huo Y, Sandler KL, Maldonado F, Landman BA. Body composition assessment with limited field-of-view computed tomography: A semantic image extension perspective. Medical image analysis. 2023 Aug;88:102852. Epub 2023 May 27. PMID: 37276799