Program Official
Principal Investigator
Ziding
Feng
Awardee Organization
Fred Hutchinson Cancer Center
United States
Fiscal Year
2024
Activity Code
U24
Early Stage Investigator Grants (ESI)
Not Applicable
Project End Date
NIH RePORTER
For more information, see NIH RePORTER Project 5U24CA230144-08
Consortium on Translational Research in Early Detection of Liver Cancer:Data Management and Coordinating Center (DMCC)
The key to success of the Consortium on Translational Research in Early Detection of Liver Cancer (Consortium) lies in good communication among scientists in multiple disciplines, efficient evaluation and prioritization of promising biomarkers, and rigorous validation studies to demonstrate their potential clinical utilities in improving the surveillance and early detection of liver cancer and stratifying the risk of liver cancer in patients with cirrhosis. The overall aims of the proposed Data Management and Coordinating Center (DMCC) are to (i) enhance communication and collaboration among Consortium investigators; (ii) coordinate Consortium collaborative research and provide statistical support; (iii) develop and maintain integrated research and biorepository databases for Consortium studies; and (iv) support and facilitate trans-Consortium collaborative research. Under the direction of the Consortium Steering Committee, the DMCC will 1) perform network coordination and promote collaborations among scientific investigators by providing support for Consortium meetings and conference calls, developing and maintaining all Consortium documents, including the Manual of Operations and Procedures (MOP), and by maintaining and enhancing the Consortium’s secure website; 2) support Consortium collaborative studies by working with Consortium investigators on study design, protocol development, data forms, and study manuals; coordinating and monitoring studies; tracking specimen sharing, blinding, and randomization; and performing QA/QC and study evaluation; 3) maintain and enhance the COMPASS Data Management System (CDMS) used to facilitate Consortium collaborative activities. CDMS provides online, endto-end data management solutions, including investigator and study coordinator communications, regulatory compliance, remote subject registration, clinical data capture, biospecimen sample management, imaging data repository, and document management. CDMS can provide online visibility of analytical datasets for all participating researchers, and statistical and informatic tools relevant to Consortium research; 4) support and facilitate trans-Consortium collaborative studies by promoting team science, monitoring study procedures, and using cutting edge statistical, computational, and Artificial Intelligence methods to ensure efficient yet rigorous study design and maximize research outputs. Our research strategy is built from this guiding principle: provide the highest quality service to the Consortium while remaining innovative and providing scientific leadership to help the Consortium achieve its mission. Our qualifications include being the DMCC for the Early Detection Research Network since its inception, serving as lead statisticians for the two largest ongoing cirrhosis cohort studies in this country, and being responsible for two FDA-cleared Imaging AI products and many statistical innovations in early detection research.
Publications
- Jiang X, Li W, Wang K, Li R, Ning J for the Alzheimer’s Disease Neuroimaging Initiative. Analyzing heterogeneity in biomarker discriminative performance through partial time-dependent receiver operating characteristic curve modeling. Statistical methods in medical research. 2024 Aug;33(8):1424-1436. Epub 2024 Jul 25. PMID: 39053568
- Li W, Li R, Feng Z, Ning J, Alzheimer’s Disease Neuroimaging Initiative. Dynamic and concordance-assisted learning for risk stratification with application to Alzheimer's disease. Biostatistics (Oxford, England). 2024 Sep 10. Epub 2024 Sep 10. PMID: 39255368
- Li W, Li R, Yan Q, Feng Z, Ning J. Conditional concordance-assisted learning under matched case-control design for combining biomarkers for population screening. Statistics in medicine. 2023 Apr 30;42(9):1398-1411. Epub 2023 Feb 2. PMID: 36733187
- Liu X, Ning J, He X, Tilley BC, Li R. Semiparametric regression modeling of the global percentile outcome. Journal of statistical planning and inference. 2023 Jan;222:149-159. Epub 2022 Jun 24. PMID: 36467464
- Singal AG, Hoshida Y, Pinato DJ, Marrero J, Nault JC, Paradis V, Tayob N, Sherman M, Lim YS, Feng Z, Lok AS, Rinaudo JA, Srivastava S, Llovet JM, Villanueva A. International Liver Cancer Association (ILCA) White Paper on Biomarker Development for Hepatocellular Carcinoma. Gastroenterology. 2021 Jun;160(7):2572-2584. Epub 2021 Mar 9. PMID: 33705745
- Chen Z, Ning J, Shen Y, Qin J. Combining primary cohort data with external aggregate information without assuming comparability. Biometrics. 2021 Sep;77(3):1024-1036. Epub 2020 Aug 25. PMID: 32827153
- Kanwal F, Khaderi S, Singal AG, Marrero JA, Asrani SK, Amos CI, Thrift AP, Kramer JR, Yu X, Cao Y, Luster M, Al-Sarraj A, Ning J, El-Serag HB. Risk Stratification Model for Hepatocellular Cancer in Patients With Cirrhosis. Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association. 2023 Dec;21(13):3296-3304.e3. Epub 2023 Apr 30. PMID: 37390101
- Zhang C, Ning J, Belle SH, Squires RH, Cai J, Li R. Assessing predictive discrimination performance of biomarkers in the presence of treatment-induced dependent censoring. Journal of the Royal Statistical Society. Series C, Applied statistics. 2022 Nov;71(5):1137-1157. Epub 2022 May 25. PMID: 36466585
- Li R, Ning J, Feng Z. Estimation and inference of predictive discrimination for survival outcome risk prediction models. Lifetime data analysis. 2022 Apr;28(2):219-240. Epub 2022 Jan 21. PMID: 35061146
- El-Serag HB, Kanwal F, Feng Z, Marrero JA, Khaderi S, Singal AG, Texas Hepatocellular Carcinoma Consortium. Risk Factors for Cirrhosis in Contemporary Hepatology Practices-Findings From the Texas Hepatocellular Carcinoma Consortium Cohort. Gastroenterology. 2020 Jul;159(1):376-377. Epub 2020 Mar 29. PMID: 32234536
- Zhang C, Ning J, Cai J, Squires JE, Belle SH, Li R. Dynamic risk score modeling for multiple longitudinal risk factors and survival. Computational statistics & data analysis. 2024 Jan;189. Epub 2023 Aug 30. PMID: 37720873
- Parikh ND, Tayob N, Al-Jarrah T, Kramer J, Melcher J, Smith D, Marquardt P, Liu PH, Tang R, Kanwal F, Singal AG. Barriers to Surveillance for Hepatocellular Carcinoma in a Multicenter Cohort. JAMA network open. 2022 Jul 1;5(7):e2223504. PMID: 35867057
- Tayob N, Feng Z. Personalized statistical learning algorithms to improve the early detection of cancer using longitudinal biomarkers. Cancer biomarkers : section A of Disease markers. 2022;33(2):199-210. PMID: 35213362
- Yokoo T, Masaki N, Parikh ND, Lane BF, Feng Z, Mendiratta-Lala M, Lee CH, Khatri G, Marsh TL, Shetty K, Dunn CT, Al-Jarrah T, Aslam A, Davenport MS, Gopal P, Rich NE, Lok AS, Singal AG. Multicenter Validation of Abbreviated MRI for Detecting Early-Stage Hepatocellular Carcinoma. Radiology. 2023 Apr;307(2):e220917. Epub 2023 Jan 24. PMID: 36692401
- Singal AG, Tayob N, Mehta A, Marrero JA, El-Serag H, Jin Q, Saenz de Viteri C, Fobar A, Parikh ND. GALAD demonstrates high sensitivity for HCC surveillance in a cohort of patients with cirrhosis. Hepatology (Baltimore, Md.). 2022 Mar;75(3):541-549. Epub 2021 Dec 17. PMID: 34618932
- Ding M, Ning J, Li R. Evaluation of competing risks prediction models using polytomous discrimination index. The Canadian journal of statistics = Revue canadienne de statistique. 2021 Sep;49(3):731-753. Epub 2020 Nov 20. PMID: 34707327
- Benhammou JN, Rich NE, Cholankeril G, Zhang P, Zeng W, Rao S, Tayob N, National Cancer Institute’s Translational Liver Consortium Early-Career Working Group, Li W, Wu X, Feng S, Fujiwara N, Meng X, Zhu S, Zaidi S. DETECT: Development of Technologies for Early HCC Detection. Gastroenterology. 2022 Jul;163(1):21-27. Epub 2022 Mar 23. PMID: 35339460
- Parikh ND, Tayob N, Singal AG. Blood-based biomarkers for hepatocellular carcinoma screening: Approaching the end of the ultrasound era? Journal of hepatology. 2023 Jan;78(1):207-216. Epub 2022 Sep 8. PMID: 36089157
- Singal AG, Parikh ND, Shetty K, Han SH, Xie C, Ning J, Rinaudo JA, Arvind A, Lok AS, Kanwal F, Translational Liver Cancer Investigators. Natural History of Indeterminate Liver Nodules in Patients With Advanced Liver Disease: A Multicenter Retrospective Cohort Study. The American journal of gastroenterology. 2024 Nov 1;119(11):2251-2258. Epub 2024 Apr 30. PMID: 38686922
- Zhang J, Ning J, Li R. Evaluating Dynamic Discrimination Performance of Risk Prediction Models for Survival Outcomes. Statistics in biosciences. 2023 Jul;15(2):353-371. Epub 2023 Feb 2. PMID: 37691982
- Tayob N, Corley DA, Christie I, Almers L, Rahal AK, Richardson P, White DL, Davila J, Kanwal F, El-Serag HB. Validation of the Updated Hepatocellular Carcinoma Early Detection Screening Algorithm in a Community-Based Cohort of Patients With Cirrhosis of Multiple Etiologies. Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association. 2021 Jul;19(7):1443-1450.e6. Epub 2020 Aug 5. PMID: 32768590
- Feng Z, Marrero JA, Khaderi S, Singal AG, Kanwal F, Loo N, Beretta L, Ning J, El-Serag HB. Design of the Texas Hepatocellular Carcinoma Consortium Cohort Study. The American journal of gastroenterology. 2019 Mar;114(3):530-532. PMID: 30699099
- Borges KA, Dai J, Parikh ND, Schwartz M, Nguyen MH, Roberts LR, Befeler AS, Srivastava S, Rinaudo JA, Feng Z, Marrero JA, Reddy KR. Rationale and design of the Hepatocellular carcinoma Early Detection Strategy study: A multi-center longitudinal initiative of the National Cancer Institute's Early Detection Research Network. Contemporary clinical trials. 2019 Jan;76:49-54. Epub 2018 Nov 12. PMID: 30439517
- Wang J, Ma J, Cai C, Daver N, Ning J. A Bayesian hierarchical monitoring design for phase II cancer clinical trials: Incorporating information on response duration into monitoring rules. Statistics in medicine. 2021 Sep 20;40(21):4629-4639. Epub 2021 Jun 7. PMID: 34101217
- Singal AG, Tayob N, Mehta A, Marrero JA, Jin Q, Lau J, Parikh ND. Doylestown Plus and GALAD Demonstrate High Sensitivity for HCC Detection in Patients With Cirrhosis. Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association. 2022 Apr;20(4):953-955.e2. Epub 2021 Apr 20. PMID: 33864933
- Jiang X, Li W, Li R, Ning J. Addressing subject heterogeneity in time-dependent discrimination for biomarker evaluation. Statistics in medicine. 2024 Mar 30;43(7):1341-1353. Epub 2024 Jan 29. PMID: 38287471
- Tayob N, Lok ASF, Feng Z. A multivariate parametric empirical Bayes screening approach for early detection of hepatocellular carcinoma using multiple longitudinal biomarkers. Statistics in medicine. 2022 Jun 15;41(13):2338-2353. Epub 2022 Feb 23. PMID: 35199349
- Park Y, Yuan Y, Ning J, Liu S, Feng Z. Hybrid design evaluating new biomarkers when there is an existing screening test. Statistics in medicine. 2021 Apr 15;40(8):2037-2054. Epub 2021 Feb 4. PMID: 33540472
- Thrift AP, Kanwal F, Liu Y, Khaderi S, Singal AG, Marrero JA, Loo N, Asrani SK, Luster M, Al-Sarraj A, Ning J, Tsavachidis S, Gu X, Amos CI, El-Serag HB. Risk stratification for hepatocellular cancer among patients with cirrhosis using a hepatic fat polygenic risk score. PloS one. 2023 Feb 28;18(2):e0282309. doi: 10.1371/journal.pone.0282309. eCollection 2023. PMID: 36854015
- Zhang J, Ning J, Huang X, Li R. On the time-varying predictive performance of longitudinal biomarkers: Measure and estimation. Statistics in medicine. 2021 Oct 15;40(23):5065-5077. Epub 2021 Jun 22. PMID: 34159633
- Gao X, Shen W, Ning J, Feng Z, Hu J. Addressing patient heterogeneity in disease predictive model development. Biometrics. 2022 Sep;78(3):1045-1055. Epub 2021 Aug 1. PMID: 34184256
- Singal AG, Lok AS, Feng Z, Kanwal F, Parikh ND. Conceptual Model for the Hepatocellular Carcinoma Screening Continuum: Current Status and Research Agenda. Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association. 2022 Jan;20(1):9-18. Epub 2020 Sep 19. PMID: 32961340
- Kanwal F, Khaderi S, Singal AG, Marrero JA, Loo N, Asrani SK, Amos CI, Thrift AP, Gu X, Luster M, Al-Sarraj A, Ning J, El-Serag HB. Risk factors for HCC in contemporary cohorts of patients with cirrhosis. Hepatology (Baltimore, Md.). 2023 Mar 1;77(3):997-1005. Epub 2023 Feb 17. PMID: 35229329
- Yuan A, Piao J, Ning J, Qin J. Semiparametric isotonic regression modelling and estimation for group testing data. The Canadian journal of statistics = Revue canadienne de statistique. 2021 Sep;49(3):659-677. Epub 2020 Oct 28. PMID: 34690407
- Li W, Li R, Feng Z, Ning J. Semiparametric isotonic regression analysis for risk assessment under nested case-control and case-cohort designs. Statistical methods in medical research. 2020 Aug;29(8):2328-2343. Epub 2019 Dec 22. PMID: 31868119